Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Brca1P48754 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm5924-201ENSMUST00000132554 871 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm24239-201ENSMUST00000157791 255 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm23638-201ENSMUST00000175073 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm23158-201ENSMUST00000175076 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm22907-201ENSMUST00000175198 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm22625-201ENSMUST00000175382 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm22875-201ENSMUST00000175449 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm25197-201ENSMUST00000175516 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm27857-201ENSMUST00000176930 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm26268-201ENSMUST00000177685 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Gm23681-201ENSMUST00000178821 126 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm18183-201ENSMUST00000191024 615 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm8790-201ENSMUST00000194108 322 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm42999-201ENSMUST00000198049 786 ntBASIC5.33□□□□□ -1.56
Brca1P48754 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Gm3912-203ENSMUST00000211024 367 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Brca1P48754 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 Gm6177-201ENSMUST00000085589 465 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.33□□□□□ -1.56
Brca1P48754 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Brca1P48754 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brca1P48754 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brca1P48754 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.32□□□□□ -1.56
Brca1P48754 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Gm18016-201ENSMUST00000216119 801 ntBASIC5.32□□□□□ -1.56
Brca1P48754 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.32□□□□□ -1.56
Brca1P48754 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brca1P48754 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Brca1P48754 Gm24935-201ENSMUST00000103770 110 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Gm11394-201ENSMUST00000181421 517 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm8069-201ENSMUST00000197887 154 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm45392-201ENSMUST00000210441 214 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm46190-201ENSMUST00000219650 427 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.32□□□□□ -1.56
Brca1P48754 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.32□□□□□ -1.56
Brca1P48754 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brca1P48754 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brca1P48754 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brca1P48754 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.32□□□□□ -1.56
Brca1P48754 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Brca1P48754 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Brca1P48754 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brca1P48754 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brca1P48754 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Brca1P48754 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Brca1P48754 Gm25595-201ENSMUST00000102273 97 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Gm15263-201ENSMUST00000121556 642 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Gm10444-201ENSMUST00000126708 148 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.31□□□□□ -1.56
Brca1P48754 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.31□□□□□ -1.56
Brca1P48754 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brca1P48754 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.31□□□□□ -1.56
Brca1P48754 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brca1P48754 Gm8911-201ENSMUST00000213986 652 ntBASIC5.31□□□□□ -1.56
Brca1P48754 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.31□□□□□ -1.56
Brca1P48754 Gm22868-201ENSMUST00000083955 164 ntBASIC5.31□□□□□ -1.56
Brca1P48754 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms