Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13501-201ENSMUST00000118477 979 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm12465-201ENSMUST00000118591 300 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm11447-201ENSMUST00000118983 858 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.92□□□□□ -1.3
Col18a1P39061 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm26024-201ENSMUST00000158657 322 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm3091-201ENSMUST00000163408 484 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm18415-201ENSMUST00000177464 647 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm18877-201ENSMUST00000207706 539 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm18601-201ENSMUST00000220831 634 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col18a1P39061 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col18a1P39061 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col18a1P39061 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm5383-201ENSMUST00000121177 617 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm13363-201ENSMUST00000122008 522 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm22555-201ENSMUST00000157801 62 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm6647-201ENSMUST00000170514 641 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm18181-201ENSMUST00000190670 736 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm9134-201ENSMUST00000193186 551 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm44118-201ENSMUST00000204665 229 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.92□□□□□ -1.3
Col18a1P39061 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 CT030238.4-201ENSMUST00000228579 801 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm24031-201ENSMUST00000083930 131 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.92□□□□□ -1.3
Col18a1P39061 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col18a1P39061 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Synpr-207ENSMUST00000223583 3362 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm26377-201ENSMUST00000102184 108 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Gm14907-201ENSMUST00000121948 854 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm4845-201ENSMUST00000179202 562 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm38053-201ENSMUST00000193938 160 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm45382-201ENSMUST00000210607 151 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.91□□□□□ -1.3
Col18a1P39061 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Col18a1P39061 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col18a1P39061 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col18a1P39061 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.91□□□□□ -1.3
Col18a1P39061 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col18a1P39061 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Col18a1P39061 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Col18a1P39061 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Col18a1P39061 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 Gm24048-201ENSMUST00000102411 106 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col18a1P39061 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6.9□□□□□ -1.3
Col18a1P39061 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms