Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxc11P31313 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Hoxc11P31313 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.21□□□□□ -1.57
Hoxc11P31313 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxc11P31313 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Mir804-201ENSMUST00000103251 95 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm12387-201ENSMUST00000118573 955 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm15803-201ENSMUST00000120118 394 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm12808-201ENSMUST00000120597 404 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm14620-201ENSMUST00000120656 383 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm12327-201ENSMUST00000121729 1168 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm23211-201ENSMUST00000122717 308 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm25295-201ENSMUST00000122794 306 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm24960-201ENSMUST00000157923 90 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hoxc11P31313 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm27025-201ENSMUST00000182392 942 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm24949-201ENSMUST00000183609 215 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm27541-201ENSMUST00000184078 122 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm28788-201ENSMUST00000189717 375 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm29558-201ENSMUST00000190134 375 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm37837-201ENSMUST00000191743 604 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm37336-202ENSMUST00000193705 468 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm17952-201ENSMUST00000193914 747 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm22897-201ENSMUST00000197860 128 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm31520-201ENSMUST00000203048 733 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm18877-201ENSMUST00000207706 539 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm45660-201ENSMUST00000210267 151 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Gm22043-201ENSMUST00000082993 158 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Mir449a-201ENSMUST00000083641 91 ntBASIC5.21□□□□□ -1.58
Hoxc11P31313 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hoxc11P31313 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hoxc11P31313 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hoxc11P31313 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm7421-201ENSMUST00000119298 639 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm11890-201ENSMUST00000119585 417 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm7365-201ENSMUST00000120877 639 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm24860-201ENSMUST00000158457 276 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm7609-204ENSMUST00000161424 461 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Gm25120-201ENSMUST00000180148 79 ntBASIC5.2□□□□□ -1.58
Hoxc11P31313 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxc11P31313 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxc11P31313 Mir6343-201ENSMUST00000183584 84 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms