Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mir6994-201ENSMUST00000198985 73 ntBASIC4.32□□□□□ -1.72
P20040 Gm42458-201ENSMUST00000201914 369 ntBASIC4.32□□□□□ -1.72
P20040 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.32□□□□□ -1.72
P20040 Gm32453-201ENSMUST00000204183 456 ntBASIC4.32□□□□□ -1.72
P20040 Gm44184-201ENSMUST00000204290 132 ntBASIC4.32□□□□□ -1.72
P20040 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.32□□□□□ -1.72
P20040 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
P20040 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
P20040 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
P20040 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.32□□□□□ -1.72
P20040 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.32□□□□□ -1.72
P20040 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.32□□□□□ -1.72
P20040 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.32□□□□□ -1.72
P20040 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.32□□□□□ -1.72
P20040 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.32□□□□□ -1.72
P20040 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.32□□□□□ -1.72
P20040 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.32□□□□□ -1.72
P20040 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm22971-201ENSMUST00000083305 97 ntBASIC4.32□□□□□ -1.72
P20040 Gm7676-201ENSMUST00000084055 319 ntBASIC4.32□□□□□ -1.72
P20040 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
P20040 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.32□□□□□ -1.72
P20040 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
P20040 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.32□□□□□ -1.72
P20040 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
P20040 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
P20040 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.32□□□□□ -1.72
P20040 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
P20040 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.32□□□□□ -1.72
P20040 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.32□□□□□ -1.72
P20040 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
P20040 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
P20040 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.31□□□□□ -1.72
P20040 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.31□□□□□ -1.72
P20040 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.31□□□□□ -1.72
P20040 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
P20040 Neat1-201ENSMUST00000173672 20771 ntBASIC4.31□□□□□ -1.72
P20040 Gm22468-201ENSMUST00000116680 120 ntBASIC4.31□□□□□ -1.72
P20040 Gm26248-201ENSMUST00000116700 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm26137-201ENSMUST00000116701 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm26190-201ENSMUST00000116704 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24617-201ENSMUST00000116705 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25778-201ENSMUST00000116713 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25774-201ENSMUST00000116717 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm22102-201ENSMUST00000116730 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm23177-201ENSMUST00000116784 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24193-201ENSMUST00000116801 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24744-201ENSMUST00000116833 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24427-201ENSMUST00000116896 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm22346-201ENSMUST00000116918 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm23606-201ENSMUST00000116938 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm22029-201ENSMUST00000116940 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm26298-201ENSMUST00000116956 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm23844-201ENSMUST00000116959 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24484-201ENSMUST00000117009 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25347-201ENSMUST00000117026 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm22112-201ENSMUST00000117032 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
P20040 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.31□□□□□ -1.72
P20040 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.31□□□□□ -1.72
P20040 Gm16345-201ENSMUST00000146065 158 ntBASIC4.31□□□□□ -1.72
P20040 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.31□□□□□ -1.72
P20040 Gm25383-201ENSMUST00000157810 144 ntBASIC4.31□□□□□ -1.72
P20040 Gm20397-201ENSMUST00000174520 362 ntBASIC4.31□□□□□ -1.72
P20040 Gm22991-201ENSMUST00000178126 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25754-201ENSMUST00000178653 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm22419-201ENSMUST00000178780 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24802-201ENSMUST00000178897 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25208-201ENSMUST00000178964 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm24567-201ENSMUST00000179294 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm23943-201ENSMUST00000179712 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm25228-201ENSMUST00000180121 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm23304-201ENSMUST00000180209 121 ntBASIC4.31□□□□□ -1.72
P20040 Gm29813-201ENSMUST00000195856 447 ntBASIC4.31□□□□□ -1.72
P20040 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.31□□□□□ -1.72
P20040 Gm42643-201ENSMUST00000200504 279 ntBASIC4.31□□□□□ -1.72
P20040 Gm42666-201ENSMUST00000201954 152 ntBASIC4.31□□□□□ -1.72
P20040 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.31□□□□□ -1.72
P20040 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.31□□□□□ -1.72
P20040 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.31□□□□□ -1.72
P20040 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.31□□□□□ -1.72
P20040 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.31□□□□□ -1.72
P20040 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.31□□□□□ -1.72
P20040 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.31□□□□□ -1.72
P20040 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
P20040 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
P20040 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
P20040 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.31□□□□□ -1.72
P20040 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
P20040 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.31□□□□□ -1.72
P20040 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms