Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm22243-201ENSMUST00000178754 120 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm8790-201ENSMUST00000194108 322 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Gm43710-201ENSMUST00000199583 452 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.61□□□□□ -1.51
Col4a1P02463 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm8556-201ENSMUST00000210437 664 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.61□□□□□ -1.51
Col4a1P02463 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a1P02463 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.6□□□□□ -1.51
Col4a1P02463 Gm15151-201ENSMUST00000117106 177 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm8666-201ENSMUST00000117517 292 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm13501-201ENSMUST00000118477 979 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm8215-201ENSMUST00000120627 990 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Mir5134-201ENSMUST00000175529 78 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm20673-201ENSMUST00000177167 430 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm44354-201ENSMUST00000196017 143 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col4a1P02463 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col4a1P02463 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.6□□□□□ -1.51
Col4a1P02463 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a1P02463 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.6□□□□□ -1.51
Col4a1P02463 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Gm14775-201ENSMUST00000122089 310 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Gm22204-201ENSMUST00000122654 327 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Gm23905-201ENSMUST00000157568 109 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Gm24745-201ENSMUST00000157840 85 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Gm25224-201ENSMUST00000158195 68 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col4a1P02463 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col4a1P02463 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col4a1P02463 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Col4a1P02463 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.59□□□□□ -1.51
Col4a1P02463 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col4a1P02463 Mir5106-201ENSMUST00000174936 73 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Gm25999-201ENSMUST00000175398 133 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Gm18482-201ENSMUST00000202405 760 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Gm43895-201ENSMUST00000203219 855 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Col4a1P02463 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Col4a1P02463 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.59□□□□□ -1.52
Col4a1P02463 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col4a1P02463 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.59□□□□□ -1.52
Col4a1P02463 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
Col4a1P02463 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a1P02463 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col4a1P02463 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Col4a1P02463 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC5.58□□□□□ -1.52
Col4a1P02463 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col4a1P02463 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.58□□□□□ -1.52
Col4a1P02463 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a1P02463 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a1P02463 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.58□□□□□ -1.52
Col4a1P02463 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a1P02463 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col4a1P02463 Gm11878-201ENSMUST00000117908 400 ntBASIC5.58□□□□□ -1.52
Col4a1P02463 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.58□□□□□ -1.52
Col4a1P02463 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.58□□□□□ -1.52
Col4a1P02463 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col4a1P02463 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col4a1P02463 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a1P02463 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col4a1P02463 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms