Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb2S4R1M3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb2S4R1M3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb2S4R1M3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb2S4R1M3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.63■□□□□ 0.41
H2afb2S4R1M3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb2S4R1M3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.61■□□□□ 0.41
H2afb2S4R1M3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms