Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h3Q9Z0Y9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm10517-202ENSMUST00000192970 758 ntBASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h3Q9Z0Y9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm6659-201ENSMUST00000174752 547 ntBASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h3Q9Z0Y9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
Nr1h3Q9Z0Y9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1h3Q9Z0Y9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1h3Q9Z0Y9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nr1h3Q9Z0Y9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.08■□□□□ 0.65
Nr1h3Q9Z0Y9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nr1h3Q9Z0Y9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.08■□□□□ 0.65
Nr1h3Q9Z0Y9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nr1h3Q9Z0Y9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm38027-201ENSMUST00000192315 235 ntBASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms