Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh20Q9Z0M3 Gm10418-201ENSMUST00000100943 576 ntBASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cdh20Q9Z0M3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Gm12441-201ENSMUST00000121806 588 ntBASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Mir2861-201ENSMUST00000175539 82 ntBASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Gm10138-203ENSMUST00000206952 366 ntBASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh20Q9Z0M3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Gm29791-202ENSMUST00000207888 369 ntBASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh20Q9Z0M3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh20Q9Z0M3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Gm11249-201ENSMUST00000117071 859 ntBASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Mir6349-201ENSMUST00000184059 97 ntBASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh20Q9Z0M3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms