Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcb1Q9Z0H3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Gm7638-201ENSMUST00000121348 967 ntBASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Gm45058-201ENSMUST00000205810 766 ntBASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcb1Q9Z0H3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcb1Q9Z0H3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcb1Q9Z0H3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcb1Q9Z0H3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcb1Q9Z0H3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcb1Q9Z0H3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcb1Q9Z0H3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcb1Q9Z0H3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms