Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Gm8969-201ENSMUST00000199694 526 ntBASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Gm20049-201ENSMUST00000219950 730 ntBASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ClcnkaQ9WUB7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ClcnkaQ9WUB7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ClcnkaQ9WUB7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ClcnkaQ9WUB7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClcnkaQ9WUB7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClcnkaQ9WUB7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Mtag2-201ENSMUST00000058665 714 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms