Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubd1Q9R1K7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubd1Q9R1K7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubd1Q9R1K7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Tubd1Q9R1K7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubd1Q9R1K7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tubd1Q9R1K7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tubd1Q9R1K7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.89■□□□□ 0.46
Tubd1Q9R1K7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.89■□□□□ 0.46
Tubd1Q9R1K7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tubd1Q9R1K7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubd1Q9R1K7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tubd1Q9R1K7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubd1Q9R1K7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubd1Q9R1K7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms