Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nek3Q9R0A5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nek3Q9R0A5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nek3Q9R0A5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Mir2861-201ENSMUST00000175539 82 ntBASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek3Q9R0A5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Gm7291-201ENSMUST00000199147 382 ntBASIC19.29■□□□□ 0.68
Nek3Q9R0A5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek3Q9R0A5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek3Q9R0A5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek3Q9R0A5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nek3Q9R0A5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nek3Q9R0A5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Nek3Q9R0A5 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.26■□□□□ 0.67
Nek3Q9R0A5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek3Q9R0A5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek3Q9R0A5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek3Q9R0A5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek3Q9R0A5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms