Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn2Q9R0A1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
Clcn2Q9R0A1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn2Q9R0A1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn2Q9R0A1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn2Q9R0A1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn2Q9R0A1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18■□□□□ 0.47
Clcn2Q9R0A1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Clcn2Q9R0A1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Clcn2Q9R0A1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18■□□□□ 0.47
Clcn2Q9R0A1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18■□□□□ 0.47
Clcn2Q9R0A1 Idnk-204ENSMUST00000226010 1898 ntBASIC18■□□□□ 0.47
Clcn2Q9R0A1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn2Q9R0A1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18■□□□□ 0.47
Clcn2Q9R0A1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn2Q9R0A1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn2Q9R0A1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn2Q9R0A1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn2Q9R0A1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.98■□□□□ 0.47
Clcn2Q9R0A1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn2Q9R0A1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.98■□□□□ 0.47
Clcn2Q9R0A1 Gm20049-201ENSMUST00000219950 730 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms