Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44357-201ENSMUST00000195897 142 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm19658-201ENSMUST00000196231 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44367-201ENSMUST00000196836 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44350-201ENSMUST00000197197 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44390-201ENSMUST00000197533 144 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44313-201ENSMUST00000198018 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44486-201ENSMUST00000198508 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44314-201ENSMUST00000199263 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44394-201ENSMUST00000199558 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44484-201ENSMUST00000199873 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44466-201ENSMUST00000200264 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm44359-201ENSMUST00000200671 138 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a4Q9QZR9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Col4a4Q9QZR9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.77■□□□□ 0.43
Col4a4Q9QZR9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.77■□□□□ 0.43
Col4a4Q9QZR9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Col4a4Q9QZR9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a4Q9QZR9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.76■□□□□ 0.43
Col4a4Q9QZR9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a4Q9QZR9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a4Q9QZR9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a4Q9QZR9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Gm27702-201ENSMUST00000184512 56 ntBASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col4a4Q9QZR9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms