Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Limd1Q9QXD8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Limd1Q9QXD8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limd1Q9QXD8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limd1Q9QXD8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Gm6345-202ENSMUST00000180900 204 ntBASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limd1Q9QXD8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limd1Q9QXD8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Gm18101-201ENSMUST00000215769 548 ntBASIC19.41■□□□□ 0.7
Limd1Q9QXD8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limd1Q9QXD8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limd1Q9QXD8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Limd1Q9QXD8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Gm16061-201ENSMUST00000122167 857 ntBASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limd1Q9QXD8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms