Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chaf1aQ9QWF0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chaf1aQ9QWF0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chaf1aQ9QWF0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chaf1aQ9QWF0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chaf1aQ9QWF0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Gm6365-201ENSMUST00000054711 744 ntBASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chaf1aQ9QWF0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Gm7291-201ENSMUST00000199147 382 ntBASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1aQ9QWF0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Gm42569-201ENSMUST00000200539 472 ntBASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1aQ9QWF0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms