Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.27■□□□□ 0.51
Scn5aQ9JJV9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Scn5aQ9JJV9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Fst-202ENSMUST00000223640 2612 ntBASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn5aQ9JJV9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn5aQ9JJV9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn5aQ9JJV9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gm7153-201ENSMUST00000117092 455 ntBASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn5aQ9JJV9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn5aQ9JJV9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn5aQ9JJV9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms