Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup50Q9JIH2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nup50Q9JIH2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup50Q9JIH2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup50Q9JIH2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Gm15039-201ENSMUST00000118914 875 ntBASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup50Q9JIH2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nup50Q9JIH2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nup50Q9JIH2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nup50Q9JIH2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms