Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf22Q9ER62 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf22Q9ER62 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf22Q9ER62 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf22Q9ER62 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Timm23-208ENSMUST00000226683 750 ntBASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf22Q9ER62 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Gm21814-202ENSMUST00000203277 873 ntBASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf22Q9ER62 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Gm3375-201ENSMUST00000203929 796 ntBASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf22Q9ER62 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms