Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a3bpQ9EQG9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Gm12896-201ENSMUST00000118430 226 ntBASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Zfp783-201ENSMUST00000095946 670 ntBASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a3bpQ9EQG9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a3bpQ9EQG9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Gm2559-201ENSMUST00000201323 363 ntBASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a3bpQ9EQG9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a3bpQ9EQG9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a3bpQ9EQG9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms