Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Gm715-201ENSMUST00000117865 831 ntBASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssmem1Q9D9Y8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Gm10252-201ENSMUST00000209541 832 ntBASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssmem1Q9D9Y8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ssmem1Q9D9Y8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssmem1Q9D9Y8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Ssmem1Q9D9Y8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Grk6-206ENSMUST00000224995 2971 ntBASIC15.19■□□□□ 0.02
Ssmem1Q9D9Y8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms