Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Gm11249-201ENSMUST00000117071 859 ntBASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c6Q9D8P7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c6Q9D8P7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c6Q9D8P7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Gm15375-201ENSMUST00000119510 849 ntBASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Gm12441-201ENSMUST00000121806 588 ntBASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c6Q9D8P7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Gm20049-201ENSMUST00000219950 730 ntBASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c6Q9D8P7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf3c6Q9D8P7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf3c6Q9D8P7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf3c6Q9D8P7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf3c6Q9D8P7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf3c6Q9D8P7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms