Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bl1Q9D701 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Gm9959-201ENSMUST00000068277 390 ntBASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bl1Q9D701 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm27801-201ENSMUST00000184174 223 ntBASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Golgb1-201ENSMUST00000023534 498 ntBASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Upk3bl1Q9D701 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Upk3bl1Q9D701 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Upk3bl1Q9D701 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Upk3bl1Q9D701 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Gm45102-201ENSMUST00000207427 857 ntBASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Upk3bl1Q9D701 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms