Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ShpkQ9D5J6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
ShpkQ9D5J6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShpkQ9D5J6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShpkQ9D5J6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ShpkQ9D5J6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ShpkQ9D5J6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ShpkQ9D5J6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ShpkQ9D5J6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms