Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp4Q9D4F8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp4Q9D4F8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp4Q9D4F8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp4Q9D4F8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Gm30025-201ENSMUST00000218555 728 ntBASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.81■□□□□ 0.6
Tubgcp4Q9D4F8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp4Q9D4F8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp4Q9D4F8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp4Q9D4F8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp4Q9D4F8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Tubgcp4Q9D4F8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp4Q9D4F8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp4Q9D4F8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tubgcp4Q9D4F8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tubgcp4Q9D4F8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms