Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Gm7213-201ENSMUST00000215977 950 ntBASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx29Q9D3S3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.39■□□□□ 0.7
Snx29Q9D3S3 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snx29Q9D3S3 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snx29Q9D3S3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snx29Q9D3S3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Gm9103-201ENSMUST00000119371 405 ntBASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Gm7284-201ENSMUST00000131667 944 ntBASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx29Q9D3S3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx29Q9D3S3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Gm27741-201ENSMUST00000185060 237 ntBASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx29Q9D3S3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx29Q9D3S3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.34■□□□□ 0.69
Snx29Q9D3S3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx29Q9D3S3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx29Q9D3S3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.33■□□□□ 0.69
Snx29Q9D3S3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx29Q9D3S3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Snx29Q9D3S3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.33■□□□□ 0.69
Snx29Q9D3S3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Snx29Q9D3S3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Gm11355-201ENSMUST00000121120 306 ntBASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.33■□□□□ 0.68
Snx29Q9D3S3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms