Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rufy3Q9D394 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Dio3-201ENSMUST00000097228 1449 ntBASIC20.7■□□□□ 0.9
Rufy3Q9D394 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.7■□□□□ 0.9
Rufy3Q9D394 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rufy3Q9D394 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Gm13401-201ENSMUST00000117074 291 ntBASIC20.69■□□□□ 0.9
Rufy3Q9D394 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.69■□□□□ 0.9
Rufy3Q9D394 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rufy3Q9D394 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.68■□□□□ 0.9
Rufy3Q9D394 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rufy3Q9D394 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Gm2559-201ENSMUST00000201323 363 ntBASIC20.67■□□□□ 0.9
Rufy3Q9D394 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Gm10602-201ENSMUST00000098239 609 ntBASIC20.67■□□□□ 0.9
Rufy3Q9D394 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rufy3Q9D394 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rufy3Q9D394 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rufy3Q9D394 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.66■□□□□ 0.9
Rufy3Q9D394 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Gm4968-201ENSMUST00000071458 858 ntBASIC20.66■□□□□ 0.9
Rufy3Q9D394 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rufy3Q9D394 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.65■□□□□ 0.9
Rufy3Q9D394 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rufy3Q9D394 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Rufy3Q9D394 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rufy3Q9D394 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rufy3Q9D394 Gm10418-201ENSMUST00000100943 576 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms