Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim42Q9D2H5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.64■□□□□ 0.41
Trim42Q9D2H5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim42Q9D2H5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim42Q9D2H5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim42Q9D2H5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim42Q9D2H5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.6■□□□□ 0.41
Trim42Q9D2H5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Gm8493-201ENSMUST00000196881 489 ntBASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim42Q9D2H5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms