Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Mir8112-201ENSMUST00000184382 131 ntBASIC16.75■□□□□ 0.27
Upk1aQ9D132 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1aQ9D132 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Gm13216-201ENSMUST00000117145 591 ntBASIC16.74■□□□□ 0.27
Upk1aQ9D132 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1aQ9D132 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Gm10493-201ENSMUST00000097270 612 ntBASIC16.73■□□□□ 0.27
Upk1aQ9D132 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1aQ9D132 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.73■□□□□ 0.27
Upk1aQ9D132 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.72■□□□□ 0.27
Upk1aQ9D132 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk1aQ9D132 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Gm42778-201ENSMUST00000199644 553 ntBASIC16.71■□□□□ 0.27
Upk1aQ9D132 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk1aQ9D132 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upk1aQ9D132 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.7■□□□□ 0.26
Upk1aQ9D132 Gm6420-201ENSMUST00000193885 723 ntBASIC16.7■□□□□ 0.26
Upk1aQ9D132 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.7■□□□□ 0.26
Upk1aQ9D132 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.7■□□□□ 0.26
Upk1aQ9D132 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.7■□□□□ 0.26
Upk1aQ9D132 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.7■□□□□ 0.26
Upk1aQ9D132 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.69■□□□□ 0.26
Upk1aQ9D132 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upk1aQ9D132 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms