Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx56Q9D0R4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx56Q9D0R4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx56Q9D0R4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx56Q9D0R4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx56Q9D0R4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.52■□□□□ 0.55
Ddx56Q9D0R4 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.52■□□□□ 0.55
Ddx56Q9D0R4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx56Q9D0R4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ddx56Q9D0R4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx56Q9D0R4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Gm13401-201ENSMUST00000117074 291 ntBASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx56Q9D0R4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx56Q9D0R4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms