Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim13Q9CYB0 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim13Q9CYB0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim13Q9CYB0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim13Q9CYB0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Gm43017-201ENSMUST00000198296 752 ntBASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim13Q9CYB0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Gm13146-201ENSMUST00000118508 780 ntBASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim13Q9CYB0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms