Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Chchd1Q9CQA6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chchd1Q9CQA6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chchd1Q9CQA6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chchd1Q9CQA6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms