Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.27■□□□□ 0.35
Trim16Q99PP9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Trim16Q99PP9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim16Q99PP9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim16Q99PP9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim16Q99PP9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Fst-202ENSMUST00000223640 2612 ntBASIC17.25■□□□□ 0.35
Trim16Q99PP9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.25■□□□□ 0.35
Trim16Q99PP9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.25■□□□□ 0.35
Trim16Q99PP9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim16Q99PP9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim16Q99PP9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim16Q99PP9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.23■□□□□ 0.35
Trim16Q99PP9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim16Q99PP9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim16Q99PP9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim16Q99PP9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.22■□□□□ 0.35
Trim16Q99PP9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.22■□□□□ 0.35
Trim16Q99PP9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim16Q99PP9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.21■□□□□ 0.35
Trim16Q99PP9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.21■□□□□ 0.35
Trim16Q99PP9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.21■□□□□ 0.35
Trim16Q99PP9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim16Q99PP9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim16Q99PP9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.21■□□□□ 0.34
Trim16Q99PP9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim16Q99PP9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms