Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf2ird2Q99NI3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf2ird2Q99NI3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gtf2ird2Q99NI3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf2ird2Q99NI3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf2ird2Q99NI3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Mir6982-201ENSMUST00000184354 68 ntBASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf2ird2Q99NI3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.07■□□□□ 0.48
Gtf2ird2Q99NI3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms