Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm6576-201ENSMUST00000169678 883 ntBASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr3Q99MB1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr3Q99MB1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr3Q99MB1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Gm5643-201ENSMUST00000117081 966 ntBASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr3Q99MB1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tlr3Q99MB1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr3Q99MB1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Tlr3Q99MB1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.89■□□□□ 0.61
Tlr3Q99MB1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Gm18666-201ENSMUST00000190039 958 ntBASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.89■□□□□ 0.61
Tlr3Q99MB1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms