Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd3Q99LE3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Timm23-208ENSMUST00000226683 750 ntBASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd3Q99LE3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd3Q99LE3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd3Q99LE3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd3Q99LE3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd3Q99LE3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Lysmd3Q99LE3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Odf3b-204ENSMUST00000227834 930 ntBASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd3Q99LE3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd3Q99LE3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd3Q99LE3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms