Protein–RNA interactions for Protein: Q99J87

Dhx58, Probable ATP-dependent RNA helicase DHX58, mousemouse

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx58Q99J87 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Gm22325-201ENSMUST00000158904 308 ntBASIC18.5■□□□□ 0.55
Dhx58Q99J87 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx58Q99J87 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.49■□□□□ 0.55
Dhx58Q99J87 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx58Q99J87 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx58Q99J87 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.47■□□□□ 0.55
Dhx58Q99J87 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.47■□□□□ 0.55
Dhx58Q99J87 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.47■□□□□ 0.55
Dhx58Q99J87 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx58Q99J87 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx58Q99J87 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Idnk-204ENSMUST00000226010 1898 ntBASIC18.45■□□□□ 0.54
Dhx58Q99J87 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx58Q99J87 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Dhx58Q99J87 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dhx58Q99J87 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dhx58Q99J87 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms