Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.84■□□□□ 0.93
Col20a1Q923P0 Gm2274-201ENSMUST00000184539 609 ntBASIC20.84■□□□□ 0.93
Col20a1Q923P0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Gm45058-201ENSMUST00000205810 766 ntBASIC20.84■□□□□ 0.93
Col20a1Q923P0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col20a1Q923P0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col20a1Q923P0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col20a1Q923P0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.83■□□□□ 0.92
Col20a1Q923P0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col20a1Q923P0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col20a1Q923P0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col20a1Q923P0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.82■□□□□ 0.92
Col20a1Q923P0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col20a1Q923P0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.81■□□□□ 0.92
Col20a1Q923P0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Fst-202ENSMUST00000223640 2612 ntBASIC20.81■□□□□ 0.92
Col20a1Q923P0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col20a1Q923P0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.8■□□□□ 0.92
Col20a1Q923P0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.79■□□□□ 0.92
Col20a1Q923P0 Idnk-204ENSMUST00000226010 1898 ntBASIC20.79■□□□□ 0.92
Col20a1Q923P0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col20a1Q923P0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.79■□□□□ 0.92
Col20a1Q923P0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col20a1Q923P0 Gm7791-201ENSMUST00000219066 539 ntBASIC20.78■□□□□ 0.92
Col20a1Q923P0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms