Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha8Q91Y12 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha8Q91Y12 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Gm11927-201ENSMUST00000118472 759 ntBASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha8Q91Y12 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha8Q91Y12 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha8Q91Y12 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha8Q91Y12 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Pcdha8Q91Y12 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms