Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga9Q91XX9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga9Q91XX9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga9Q91XX9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.44■□□□□ 0.38
Pcdhga9Q91XX9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Gm715-201ENSMUST00000117865 831 ntBASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga9Q91XX9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga9Q91XX9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms