Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lims2Q91XD2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gm30025-201ENSMUST00000218555 728 ntBASIC18.07■□□□□ 0.48
Lims2Q91XD2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Lims2Q91XD2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lims2Q91XD2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.06■□□□□ 0.48
Lims2Q91XD2 Gm7638-201ENSMUST00000121348 967 ntBASIC18.06■□□□□ 0.48
Lims2Q91XD2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lims2Q91XD2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lims2Q91XD2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.05■□□□□ 0.48
Lims2Q91XD2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.05■□□□□ 0.48
Lims2Q91XD2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.05■□□□□ 0.48
Lims2Q91XD2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.05■□□□□ 0.48
Lims2Q91XD2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.04■□□□□ 0.48
Lims2Q91XD2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.04■□□□□ 0.48
Lims2Q91XD2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.03■□□□□ 0.48
Lims2Q91XD2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.03■□□□□ 0.48
Lims2Q91XD2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.03■□□□□ 0.48
Lims2Q91XD2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.03■□□□□ 0.48
Lims2Q91XD2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Lims2Q91XD2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms