Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trex1Q91XB0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trex1Q91XB0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.25■□□□□ 0.83
Trex1Q91XB0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trex1Q91XB0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trex1Q91XB0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.23■□□□□ 0.83
Trex1Q91XB0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trex1Q91XB0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trex1Q91XB0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.21■□□□□ 0.83
Trex1Q91XB0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Trex1Q91XB0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trex1Q91XB0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Gm13474-201ENSMUST00000122466 815 ntBASIC20.2■□□□□ 0.82
Trex1Q91XB0 Gm33142-201ENSMUST00000193913 867 ntBASIC20.2■□□□□ 0.82
Trex1Q91XB0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trex1Q91XB0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trex1Q91XB0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms