Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.19■□□□□ 0.98
StrcQ8VIM6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.19■□□□□ 0.98
StrcQ8VIM6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrcQ8VIM6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrcQ8VIM6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
StrcQ8VIM6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.16■□□□□ 0.98
StrcQ8VIM6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
StrcQ8VIM6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrcQ8VIM6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Gm12895-201ENSMUST00000122214 226 ntBASIC21.15■□□□□ 0.98
StrcQ8VIM6 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.15■□□□□ 0.98
StrcQ8VIM6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrcQ8VIM6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
StrcQ8VIM6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
StrcQ8VIM6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
StrcQ8VIM6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrcQ8VIM6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
StrcQ8VIM6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.13■□□□□ 0.97
StrcQ8VIM6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.13■□□□□ 0.97
StrcQ8VIM6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrcQ8VIM6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Gm18206-201ENSMUST00000207027 926 ntBASIC21.11■□□□□ 0.97
StrcQ8VIM6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms