Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Gm11594-201ENSMUST00000122313 162 ntBASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Gm2651-201ENSMUST00000203560 838 ntBASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cspg4Q8VHY0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Gm11355-201ENSMUST00000121120 306 ntBASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cspg4Q8VHY0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg4Q8VHY0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Gm11950-201ENSMUST00000121615 838 ntBASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Gm43575-201ENSMUST00000196420 516 ntBASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg4Q8VHY0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms