Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40bQ8VHP8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40bQ8VHP8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40bQ8VHP8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40bQ8VHP8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Gm45417-201ENSMUST00000209533 758 ntBASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40bQ8VHP8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms