Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfpl4aQ8VH31 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfpl4aQ8VH31 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfpl4aQ8VH31 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rfpl4aQ8VH31 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Gm25016-201ENSMUST00000158399 131 ntBASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Gm7370-201ENSMUST00000219471 767 ntBASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfpl4aQ8VH31 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Gm37025-201ENSMUST00000195159 829 ntBASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Il3ra-202ENSMUST00000223589 738 ntBASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfpl4aQ8VH31 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfpl4aQ8VH31 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Gm9731-201ENSMUST00000209480 747 ntBASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Rfpl4aQ8VH31 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfpl4aQ8VH31 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Gm21559-201ENSMUST00000220638 855 ntBASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfpl4aQ8VH31 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms