Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Idnk-204ENSMUST00000226010 1898 ntBASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nle1Q8VEJ4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nle1Q8VEJ4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.24■□□□□ 0.51
Nle1Q8VEJ4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Gm13836-201ENSMUST00000121159 501 ntBASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nle1Q8VEJ4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Gm6433-201ENSMUST00000118634 875 ntBASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Gm11539-201ENSMUST00000119837 557 ntBASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Gm13436-201ENSMUST00000120418 567 ntBASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nle1Q8VEJ4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nle1Q8VEJ4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nle1Q8VEJ4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nle1Q8VEJ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.21■□□□□ 0.51
Nle1Q8VEJ4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nle1Q8VEJ4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms