Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa1Q8VEE4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Gm6139-201ENSMUST00000079261 882 ntBASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa1Q8VEE4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
Rpa1Q8VEE4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpa1Q8VEE4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpa1Q8VEE4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpa1Q8VEE4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa1Q8VEE4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa1Q8VEE4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.74■□□□□ 0.43
Rpa1Q8VEE4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms