Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx39aQ8VDW0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ddx39aQ8VDW0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.61■□□□□ 0.73
Ddx39aQ8VDW0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx39aQ8VDW0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx39aQ8VDW0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx39aQ8VDW0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Gm10418-201ENSMUST00000100943 576 ntBASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Gm27463-201ENSMUST00000183569 57 ntBASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Gm29791-202ENSMUST00000207888 369 ntBASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx39aQ8VDW0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx39aQ8VDW0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx39aQ8VDW0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx39aQ8VDW0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx39aQ8VDW0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Gm18959-201ENSMUST00000208954 655 ntBASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx39aQ8VDW0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms