Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.23■□□□□ 0.35
Q8VDP2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.23■□□□□ 0.35
Q8VDP2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.23■□□□□ 0.35
Q8VDP2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Q8VDP2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Q8VDP2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Q8VDP2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.22■□□□□ 0.35
Q8VDP2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.22■□□□□ 0.35
Q8VDP2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.22■□□□□ 0.35
Q8VDP2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Q8VDP2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Q8VDP2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Q8VDP2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q8VDP2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Q8VDP2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Q8VDP2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Q8VDP2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.21■□□□□ 0.35
Q8VDP2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.21■□□□□ 0.35
Q8VDP2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Q8VDP2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q8VDP2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Q8VDP2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Q8VDP2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Q8VDP2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Q8VDP2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Q8VDP2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.2■□□□□ 0.34
Q8VDP2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.2■□□□□ 0.34
Q8VDP2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Q8VDP2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q8VDP2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.19■□□□□ 0.34
Q8VDP2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Q8VDP2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 Gm22238-201ENSMUST00000175222 88 ntBASIC17.19■□□□□ 0.34
Q8VDP2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Q8VDP2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q8VDP2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Q8VDP2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q8VDP2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q8VDP2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.18■□□□□ 0.34
Q8VDP2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q8VDP2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms